How do you plot a roc curve in svm python?
Towards , the end of my program, I have the following code. Show
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I am having trouble plotting the ROC & AUC . On my side I’ve been trying to read articles and check but unsuccessful until. The fact that I am only working with one column might be the cause. Note Click here to download the full example code or to run this example in your browser via Binder Example of Receiver Operating Characteristic (ROC) metric to evaluate classifier output quality. ROC curves typically feature true positive rate on the Y axis, and false positive rate on the X axis. This means that the top left corner of the plot is the “ideal” point - a false positive rate of zero, and a true positive rate of one. This is not very realistic, but it does mean that a larger area under the curve (AUC) is usually better. The “steepness” of ROC curves is also important, since it is ideal to maximize the true positive rate while minimizing the false positive rate. ROC curves are typically used in binary classification to study the output of a classifier. In order to extend ROC curve and ROC area to multi-label classification, it is necessary to binarize the output. One ROC curve can be drawn per label, but one can also draw a ROC curve by considering each element of the label indicator matrix as a binary prediction (micro-averaging). Another evaluation measure for multi-label classification is macro-averaging, which gives equal weight to the classification of each label. import numpy as np import matplotlib.pyplot as plt from itertools import cycle from sklearn import svm, datasets from sklearn.metrics import roc_curve, auc from sklearn.model_selection import train_test_split from sklearn.preprocessing import label_binarize from sklearn.multiclass import OneVsRestClassifier from sklearn.metrics import roc_auc_score # Import some data to play with iris = datasets.load_iris() X = iris.data y = iris.target # Binarize the output y = label_binarize(y, classes=[0, 1, 2]) n_classes = y.shape[1] # Add noisy features to make the problem harder random_state = np.random.RandomState(0) n_samples, n_features = X.shape X = np.c_[X, random_state.randn(n_samples, 200 * n_features)] # shuffle and split training and test sets X_train, X_test, y_train, y_test = train_test_split(X, y, test_size=0.5, random_state=0) # Learn to predict each class against the other classifier = OneVsRestClassifier( svm.SVC(kernel="linear", probability=True, random_state=random_state) ) y_score = classifier.fit(X_train, y_train).decision_function(X_test) # Compute ROC curve and ROC area for each class fpr = dict() tpr = dict() roc_auc = dict() for i in range(n_classes): fpr[i], tpr[i], _ = roc_curve(y_test[:, i], y_score[:, i]) roc_auc[i] = auc(fpr[i], tpr[i]) # Compute micro-average ROC curve and ROC area fpr["micro"], tpr["micro"], _ = roc_curve(y_test.ravel(), y_score.ravel()) roc_auc["micro"] = auc(fpr["micro"], tpr["micro"]) Plot of a ROC curve for a specific class plt.figure() lw = 2 plt.plot( fpr[2], tpr[2], color="darkorange", lw=lw, label="ROC curve (area = %0.2f)" % roc_auc[2], ) plt.plot([0, 1], [0, 1], color="navy", lw=lw, linestyle="--") plt.xlim([0.0, 1.0]) plt.ylim([0.0, 1.05]) plt.xlabel("False Positive Rate") plt.ylabel("True Positive Rate") plt.title("Receiver operating characteristic example") plt.legend(loc="lower right") plt.show() Plot ROC curves for the multiclass problem¶Compute macro-average ROC curve and ROC area # First aggregate all false positive rates all_fpr = np.unique(np.concatenate([fpr[i] for i in range(n_classes)])) # Then interpolate all ROC curves at this points mean_tpr = np.zeros_like(all_fpr) for i in range(n_classes): mean_tpr += np.interp(all_fpr, fpr[i], tpr[i]) # Finally average it and compute AUC mean_tpr /= n_classes fpr["macro"] = all_fpr tpr["macro"] = mean_tpr roc_auc["macro"] = auc(fpr["macro"], tpr["macro"]) # Plot all ROC curves plt.figure() plt.plot( fpr["micro"], tpr["micro"], label="micro-average ROC curve (area = {0:0.2f})".format(roc_auc["micro"]), color="deeppink", linestyle=":", linewidth=4, ) plt.plot( fpr["macro"], tpr["macro"], label="macro-average ROC curve (area = {0:0.2f})".format(roc_auc["macro"]), color="navy", linestyle=":", linewidth=4, ) colors = cycle(["aqua", "darkorange", "cornflowerblue"]) for i, color in zip(range(n_classes), colors): plt.plot( fpr[i], tpr[i], color=color, lw=lw, label="ROC curve of class {0} (area = {1:0.2f})".format(i, roc_auc[i]), ) plt.plot([0, 1], [0, 1], "k--", lw=lw) plt.xlim([0.0, 1.0]) plt.ylim([0.0, 1.05]) plt.xlabel("False Positive Rate") plt.ylabel("True Positive Rate") plt.title("Some extension of Receiver operating characteristic to multiclass") plt.legend(loc="lower right") plt.show() Area under ROC for the multiclass problem¶The y_prob = classifier.predict_proba(X_test) macro_roc_auc_ovo = roc_auc_score(y_test, y_prob, multi_class="ovo", average="macro") weighted_roc_auc_ovo = roc_auc_score( y_test, y_prob, multi_class="ovo", average="weighted" ) macro_roc_auc_ovr = roc_auc_score(y_test, y_prob, multi_class="ovr", average="macro") weighted_roc_auc_ovr = roc_auc_score( y_test, y_prob, multi_class="ovr", average="weighted" ) print( "One-vs-One ROC AUC scores:\n{:.6f} (macro),\n{:.6f} " "(weighted by prevalence)".format(macro_roc_auc_ovo, weighted_roc_auc_ovo) ) print( "One-vs-Rest ROC AUC scores:\n{:.6f} (macro),\n{:.6f} " "(weighted by prevalence)".format(macro_roc_auc_ovr, weighted_roc_auc_ovr) ) One-vs-One ROC AUC scores: 0.698586 (macro), 0.665839 (weighted by prevalence) One-vs-Rest ROC AUC scores: 0.698586 (macro), 0.665839 (weighted by prevalence) Total running time of the script: ( 0 minutes 0.190 seconds) Gallery generated by Sphinx-Gallery Can we draw ROC curve for SVM?Yes, there are situations where the usual receiver operating curve cannot be obtained and only one point exists. SVMs can be set up so that they output class membership probabilities. These would be the usual value for which a threshold would be varied to produce a receiver operating curve.
How do you plot a ROC curve in Python?How to Plot a ROC Curve in Python (Step-by-Step). Step 1: Import Necessary Packages. First, we'll import the packages necessary to perform logistic regression in Python: import pandas as pd import numpy as np from sklearn. ... . Step 2: Fit the Logistic Regression Model. ... . Step 3: Plot the ROC Curve. ... . Step 4: Calculate the AUC.. How do you plot ROC curve?To plot the ROC curve, we need to calculate the TPR and FPR for many different thresholds (This step is included in all relevant libraries as scikit-learn ). For each threshold, we plot the FPR value in the x-axis and the TPR value in the y-axis. We then join the dots with a line. That's it!
How do you plot a ROC curve in python without Sklearn?“how to make roc curve without sklearn” Code Answer. import sklearn. metrics as metrics.. # calculate the fpr and tpr for all thresholds of the classification.. probs = model. predict_proba(X_test). preds = probs[:,1]. fpr, tpr, threshold = metrics. roc_curve(y_test, preds). roc_auc = metrics. auc(fpr, tpr). # method I: plt.. |